Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015796780.1_cds_XP_016451737.1_4544
CDS Infomation

[gene=LOC107776350] [db_xref=GeneID:107776350] [protein=uncharacterized protein LOC107776350 isoform X2] [protein_id=XP_016451737.1] [location=join(85476..85588,86553..86711,86812..86928,87256..87340,87900..88008,88103..88170,88252..88377,88452..88503,88573..89374,89639..89842,89976..90036,91709..91822,92431..92544,92648..92734,93728..93754)] [gbkey=CDS]
Sequence

ATGAGGGCGTCACTTTGGCCGGAGAATTCAAGCAGCGATTCATCCACGTCAATTTCGCGG
CGGCGGAATTCGCCGCCTCATTCGATTGACCAAAACCCTAATTGTAAACACAGCTGCGGT
AACGTCTTTCAGCTGCTAACGAGGAGGGAGGTATCTCCTCGAACTAAACGCAGTTCTAAG
AAGTTTTGGGGTGAGAACTCTAAATGTTCTGTTCATTCCTGTGGATTAAAAAGCCAAGTA
GCAAGAGACCCGAGACAGGGTCTTATATCATGGGTAGAGGCAGAGTCATTGAGACATTTT
TCAGCTAAGTATTGTCCACTGTTGCCTCCGCCTAGGTCTACTATTGCTGCGGCATTCAGT
CCTGATGGGAAGACACTCGCTTCTACTCACGGAGATCACACAGTAAAGATAATTGATTGC
CAAAGTGGAAAGTGCTTAAAGGTGTTAAGTGGACATCGCAGGACTCCTTGGGTGGTTCGT
TTCCATCCATTATACTCTGATATACTTGCAAGTGGAAGTTTAGACCATGAAGTTCGTTTA
TGGGATGCAAAAACTGCCGAGTGTATAGGATCACGTGATTTTTATCGTCCTATTGCATCC
ATTGCCTTCCATGCCCAAGGGGAAGTTCTGGCTGTTGCTTCAGGCCACAAGCTGTATATG
TGGCACTACAACAGAAGAGGGGAAGCATCTTCACCAGCTATCATACTAAAGACAAGACGT
TCACTTCGTGCTGTACATTTCCACCCACATGGTGCCCCATTTCTTTTAACAGCTGAGGTC
AATGATCTGGACTCATCAGATTCTTCAATGACGCTTGCAACTTCTCCGGCAAATGAATTG
CCGATCATGTCTCTACCATTCATGATCTGGCCATCAATCGCTAGAGGTGATCCTAGAATG
CCTTTGCAGCAGAGCGATGCAGACATGGCTTCTGACAGCACACAGCACAGAGCGGACACT
TCTGCATCTGTCCGACTTCTCACTTACTCAACTCCTTCTGGCCAATATGAACTTTTATTG
TCCCCTGTTGAGCCAACTTTATCTCCTGCACAAGCTCAGACTGGTTCTTCTGTTAGGTAT
ACTGAGAATGCATCTGAACCTGTAGTTGATCCTATGGAGACTGATGTGCCGGCTGAGGAA
AGAAACAATCAATTTTTCCCTTTCAGTGACCCTGCATACTGGGAATTACCTTTCTTGCAA
GGATGGTTGATTGGCCAAAGCCAAGCTGGCCGACGAGCAATTCATTCAGAGCACAGTGGT
ACCACAAATAGTGTATCGGCTTATGGTGAAGTAGAACATCCTCCTGCAGTTCCGTCAGTC
ATTTCAAACAGTAATCATCCAAGGTCTGGAAGATCTGGTTCTCGTCACCGTTCTTCACGC
TCTAGAGCGATACCTGTTGTTGGATCTGGTGATACCGCTGCTCCCATTAACGTTGTACAT
GATGAAAATGATTCTCAAGCTTTTATGAGTCGGTTCCAGTCAGAGATAGCTACTTCACTG
GCTGCAGCAGCGGCTCCCGAATTGCCTTGCACTGTGAAACTCAGAATATGGCCTTATGAT
GTTAAGGCTCCCTGTGCACCGCTTGATGCTGAAAAGTGTCGCTTAATGATACCACATGCT
GTGCTTTGTAGTGAAATGGGAGCCCACTTTTCACCATGTGGGAGATTTTTAGCAGCTTGT
GTTGCATGTATTCTGCCTAACATGGAAGCTGATCCTGGTTTTCACGGACAACTTCACCAT
GATGCCATGGGTGCTGCAACTTCACCTACCAGACATCCTATTGCAGCCCATCGGGTTATG
TATGAGCTACGAATATATTCCTTGGAGGAGGCAACGTTTGGTTTGGTGCTTGTATCTCGG
GCAATTAGAGCTGCACATTGTTTGACTTCAATTCAGTTTTCTCCAACTTCTGAGCATCTT
TTACTTGCCTATGGGCGTCGGCACGGTTCACTTCTGAAAAGTATAGTGATTGATGGAGAT
ACAACTGTACCCGTTTACACGATTCTTGAGGTCTACAGAGTTTCGGATATGGAACTTGTG
AGAGTTCTTCCCAGTGCAGAGGATGAGGTTAACGTTGCTTGTTTCCATCCTTTGGTTGGT
GGCGGCCTAGTCTATGGAACCAAGGAAGGAAAATTGAGGATCTTCCAATTTGATAAATCA
AATGGTTTGGACCGTACAGTATCCTGTTTTCCTGATGAAGACATGCTCGAGGTCCCAACA
TATGCTTTAGAAGGCTAG

Peptide Sequence

PEP ID

XP_016451737.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107776350 isoform X2 [Nicotiana tabacum]
Sequence

MRASLWPENSSSDSSTSISRRRNSPPHSIDQNPNCKHSCGNVFQLLTRREVSPRTKRSSK
KFWGENSKCSVHSCGLKSQVARDPRQGLISWVEAESLRHFSAKYCPLLPPPRSTIAAAFS
PDGKTLASTHGDHTVKIIDCQSGKCLKVLSGHRRTPWVVRFHPLYSDILASGSLDHEVRL
WDAKTAECIGSRDFYRPIASIAFHAQGEVLAVASGHKLYMWHYNRRGEASSPAIILKTRR
SLRAVHFHPHGAPFLLTAEVNDLDSSDSSMTLATSPANELPIMSLPFMIWPSIARGDPRM
PLQQSDADMASDSTQHRADTSASVRLLTYSTPSGQYELLLSPVEPTLSPAQAQTGSSVRY
TENASEPVVDPMETDVPAEERNNQFFPFSDPAYWELPFLQGWLIGQSQAGRRAIHSEHSG
TTNSVSAYGEVEHPPAVPSVISNSNHPRSGRSGSRHRSSRSRAIPVVGSGDTAAPINVVH
DENDSQAFMSRFQSEIATSLAAAAAPELPCTVKLRIWPYDVKAPCAPLDAEKCRLMIPHA
VLCSEMGAHFSPCGRFLAACVACILPNMEADPGFHGQLHHDAMGAATSPTRHPIAAHRVM
YELRIYSLEEATFGLVLVSRAIRAAHCLTSIQFSPTSEHLLLAYGRRHGSLLKSIVIDGD
TTVPVYTILEVYRVSDMELVRVLPSAEDEVNVACFHPLVGGGLVYGTKEGKLRIFQFDKS
NGLDRTVSCFPDEDMLEVPTYALEG

Transcript Sequence

Gene sequence data has not been registered.